Introducing advanced endpoint management solutions for Microsoft Intune

Does Endpoint Priviledge Management configuration take effect during Windows AutoPilot provisioning as well? (or in other words, when installing those EPM defined apps via Intune as Win32 app.) Some apps may require admin priviledge and user context execution while some may not--it'd be great if we could turn on/off the admin priviledge on the app basis while having AutoPilot deployment profile set the user account type as standard.